GMS - Genomatix Mining Station Tool name | GMS - Genomatix Mining Station |
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URL | http://www.genomatix.de/en/index.html |
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Important features | 1. It has highest quality results within shortest time.
2. Used in RNA-Seq, non-coding RNA-Seq, assembly, SNP discovery and ChIP-Seq analysis.
3. Allows multiple insertions or deletions, maps genomes and transcriptomes of 25 organisms.
4. It supports sequence and color-based tags from Illumina (Genome Analyzer and HiSeq), SOLiD, Helicos and 454 Life Sciences Sequencers. |
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Citations | |
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Year of publication | Not available |
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Rank by usage frequency | 100 |
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Comments | |
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Function | SNP discovery, ChIP seq analysis |
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Category | Paid, Downloadable |
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License | |
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Status | |
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Input file format | FASTQ |
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Output file format | |
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Operating system | Windows, Mac OS X, Linux |
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Operating language | C++, JAVA and flash |
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Platform | Illumina/Solexa, ABI SOLiD, Helicos, Roche 454 |
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Maintained by | |
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Downloadable file format | |
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Submission file format | |
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